show_rxsTree_in_rxsStructure.RdThis function shows the Rxs structure that was imported from an Rxs specification
show_rxsTree_in_rxsStructure(
x,
output = NULL,
outputModuleFilename = "extraction-tree--simple--%s.pdf",
headingLevel = 3
)The parsed Rxs specifications as read
with rxs_fromSpecifications().
When not NULL, pass a path to a
filename where the RxsTree should be written to. If multiple modules were
read, the filename is determine by outputModuleFilename, where %s will
be replaced with the module name.
The level of the heading to use is multiple modules were specified.
The produced markdown; or, when knitting, an object that knitr will print.
### Load an example Rxs project
data('rxs_minimal_example_2', package="metabefor");
### Show the basic Rxs tree that is specified
### in the Rxs specification
metabefor::show_rxsTree_in_rxsStructure(
rxs_minimal_example_2
);
#> levelName
#> 1 source
#> 2 ¦--general
#> 3 ¦ ¦--qurid
#> 4 ¦ ¦--language
#> 5 ¦ °--sourceAuthors
#> 6 ¦ °--sourceAuthor
#> 7 ¦ ¦--sourceAuthorIdentifier
#> 8 ¦ ¦--sourceAuthorName
#> 9 ¦ °--sourceAuthorORCID
#> 10 ¦--methods
#> 11 ¦ ¦--sample
#> 12 ¦ ¦ ¦--sampleSize
#> 13 ¦ ¦ °--samplingStrategy
#> 14 ¦ ¦--method
#> 15 ¦ °--variables
#> 16 ¦ °--variable
#> 17 ¦ ¦--variableIdentifier
#> 18 ¦ ¦--var_UCID
#> 19 ¦ °--measurementLevel
#> 20 °--results
#> 21 °--associations
#> 22 °--association
#> 23 ¦--associationIdentifier
#> 24 ¦--varId1
#> 25 ¦--varId2
#> 26 ¦--r
#> 27 °--t